KaliVeda
Toolkit for HIC analysis
KVSimDirAnalyser.cpp
1 //Created by KVClassFactory on Tue Feb 14 11:13:53 2017
2 //Author: John Frankland,,,
3 
4 #include "KVSimDirAnalyser.h"
5 #include "KVDataAnalysisTask.h"
6 #include <KVSimFile.h>
7 #include <KVSimDir.h>
8 #include <KVClassFactory.h>
9 #include <TStopwatch.h>
10 #include "TSystem.h"
11 
13 
14 
15 
19  : KVDataAnalyser(), fAnalysisChain(nullptr), fSimDir(nullptr), fCopyFilesToWorkDir(false)
20 {
21  // Default constructor
22 }
23 
24 
25 
28 
30 {
31  // Set up and run the analysis
32 
33  BuildChain();
34 
35  Bool_t read_all_events = (GetNbEventToRead() == 0);
36  Long64_t nevents = (!read_all_events ? GetNbEventToRead() : fAnalysisChain->GetEntries());
37  Long64_t update_interval = (nevents > 10 ? nevents / 10 : 1);
38  TString results_file_name;
39  KVSimFile* first_file = (KVSimFile*)fListOfSimFiles.First();
40  results_file_name.Form("%s_%s", GetUserClass().name.Data(), first_file->GetName());
41  TString options;
42  options.Form("SimFileName=%s,SimTitle=%s,OutputDir=%s,EventsReadInterval=%lld,BranchName=%s,CombinedOutputFile=%s,SimulationInfos=%s",
43  first_file->GetName(), fAnalysisChain->GetTitle(),
44  (is_filter_job ? first_file->GetSimDir()->GetAuxDirectory().Data() : "."),// make sure filtered files are always placed in same directory
45  update_interval, first_file->GetBranchName(),
46  results_file_name.Data(), first_file->GetTitle());
47  if (first_file->IsFiltered()) {
48  options += Form(",DataSet=%s", first_file->GetDataSet());
49  if (first_file->HasRun())
50  options += Form(",Run=%d", first_file->GetRun());
51  if (first_file->HasSystem())
52  options += Form(",System=%s", first_file->GetSystem());
53  }
54  if (!fListOfAuxFiles.IsEmpty()) {
55  // Set up list of auxiliary files
56  KVString auxfiles;
57  TIter ifi(&fListOfAuxFiles);
58  KVSimFile* auxf;
59  while ((auxf = (KVSimFile*)ifi())) {
60  if (auxfiles != "") auxfiles += "|";
61  auxfiles += auxf->GetName();
62  }
63  options += ",AuxFiles=";
64  options += auxfiles;
65  options += ",AuxDir=";
67  options += ffaux->GetSimDir()->GetDirectory();
68  options += ",AuxTreeName=";
69  options += ffaux->GetTreeName();
70  options += ",AuxBranchName=";
71  options += ffaux->GetBranchName();
72  }
73  // Add any user-defined options - notably, all options for filter are passed here
74  if (GetUserClassOptions() != "") {
75  options += ",";
76  options += GetUserClassOptions();
77  }
78 
79  // Check compilation of user class & run
81  Info("SubmitTask", "Beginning TChain::Process...");
82 #ifdef WITH_CPP11
83  if (GetProofMode() != KVDataAnalyser::EProofMode::None) fAnalysisChain->SetProof(kTRUE);
84 #else
86 #endif
87  TString analysis_class;
88  if (GetAnalysisTask()->WithUserClass())
89  analysis_class.Form("%s%s", GetUserClass().full_path_imp().Data(), GetACliCMode());
90  else analysis_class = GetUserClassName();
91  if (read_all_events) {
92  fAnalysisChain->Process(analysis_class, options.Data());
93  }
94  else {
95  fAnalysisChain->Process(analysis_class, options.Data(), GetNbEventToRead());
96  }
97  }
98  delete fAnalysisChain;
99  fAnalysisChain = nullptr;
100 }
101 
102 
103 
106 
108 {
109  // Returns path to data to be analysed
110  if (!NeedToChooseWhatToAnalyse()) {
111  KVSimFile* first_file = (KVSimFile*)fListOfSimFiles.First();
112  return first_file->GetSimDir()->GetDirectory();
113  }
114  return "";
115 }
116 
117 
118 
124 
126 {
127  //Save (in the TEnv fBatchEnv) all necessary information on analysis task which can be used to execute it later
128  //(i.e. when batch processing system executes the job).
129  //If save=kTRUE (default), write the information in a file whose name is given by ".jobname"
130  //where 'jobname' is the name of the job as given to the batch system.
131 
134  KVSimDir* simD = simF->GetSimDir();
135  GetBatchInfoFile()->SetValue("SimDir", simD->GetDirectory());
136  if(simD->HasAuxDirectory())
137  GetBatchInfoFile()->SetValue("AuxDir", simD->GetAuxDirectory());
138  if (simF->IsFiltered()) GetBatchInfoFile()->SetValue("SimFile.Type", "filtered");
139  else GetBatchInfoFile()->SetValue("SimFile.Type", "simulated");
140  GetBatchInfoFile()->SetValue("SimFiles", simF->GetName());
141  if (fListOfSimFiles.GetEntries() > 1) {
142  TIter next(&fListOfSimFiles);
143  next();
144  while ((simF = (KVSimFile*)next())) GetBatchInfoFile()->SetValue("+SimFiles", simF->GetName());
145  }
146  if (!fListOfAuxFiles.IsEmpty()) {
147  // auxiliary files for batch job
149  if (fListOfAuxFiles.GetEntries() > 1) {
150  TIter next(&fListOfAuxFiles);
151  next();
152  while ((simF = (KVSimFile*)next())) GetBatchInfoFile()->SetValue("+AuxFiles", simF->GetName());
153  }
154  }
155  if(is_filter_job) GetBatchInfoFile()->SetValue("FilterJob",1);
156  if (sav) GetBatchInfoFile()->SaveLevel(kEnvUser);
157 }
158 
159 
160 
165 
167 {
168  //Read the batch env file "filename" and initialise the analysis task using the
169  //informations in the file
170  //Returns kTRUE if all goes well
171 
172  Bool_t ok = kFALSE;
173 
175 
176  KVString simdir = GetBatchInfoFile()->GetValue("SimDir", "");
177  if (simdir == "") return ok;
178 
179  KVString auxdir = GetBatchInfoFile()->GetValue("AuxDir", "");
180 
181  is_filter_job = (Bool_t)GetBatchInfoFile()->GetValue("FilterJob",0);
182 
183  fSimDir = new KVSimDir("SIMDIR", simdir);
184  if(!auxdir.IsNull()) fSimDir->SetAuxDirectory(auxdir);
186 
187  KVString filetype = GetBatchInfoFile()->GetValue("SimFile.Type", "");
188  if (filetype == "") return ok;
189 
190  KVString simfiles = GetBatchInfoFile()->GetValue("SimFiles", "");
191  if (simfiles == "") return ok;
192 
194 
195  simfiles.Begin(" ");
196  while (!simfiles.End()) {
197  if (filetype == "simulated") fListOfSimFiles.Add(fSimDir->GetSimDataList()->FindObject(simfiles.Next()));
198  else if (filetype == "filtered") fListOfSimFiles.Add(fSimDir->GetFiltDataList()->FindObject(simfiles.Next()));
199  }
200 
201  KVString auxfiles = GetBatchInfoFile()->GetValue("AuxFiles", "");
202  if (auxfiles == "") return (ok = kTRUE);
203 
205 
206  auxfiles.Begin(" ");
207  while (!auxfiles.End()) {
209  }
210 
211  ok = kTRUE;
212 
213  return ok;
214 }
215 
216 
217 
222 
224 {
225  // Build a TChain with all files/trees to be analysed
226  //
227  // If fCopyFilesToWorkDir==true, files are first copied to working directory
228 
229  TIter next(&fListOfSimFiles);
230  KVSimFile* file;
231  while ((file = (KVSimFile*)next())) {
232  if (!fAnalysisChain) {
233  fAnalysisChain = new TChain(file->GetTreeName());
234  }
235  fAnalysisChain->Add(file->GetFullPathToFile());
236  }
237 }
238 
239 
240 
245 
247 {
248  // Use first file in list to analyse to obtain information for generating
249  // automatic batch job names (name of model, eventually info on simulated reaction,
250  // etc.)
251 
252  KVSimFile* sf = dynamic_cast<KVSimFile*>(fListOfSimFiles.First());
253  // name of TTree is (usually) name of model
254  fModel = sf->GetTreeName();
255  if (fModel == "dit_events") fModel = "DIT"; // except for DIT
256 }
257 
258 
259 
260 
263 
264 void KVSimDirAnalyser::Make(const Char_t* kvsname)
265 {
266  // Generate a new simulated analysis selector class
267 
268 #ifndef USING_ROOT6
269  KVClassFactory cf(kvsname, "Analysis of simulated events", "",
270  kTRUE, "SimulatedEventAnalysisTemplate");
271 #else
272  KVClassFactory cf(kvsname, "Analysis of simulated events", "",
273  kTRUE, "ROOT6SimulatedEventAnalysisTemplate");
274 #endif
275  cf.AddImplIncludeFile("KVSimNucleus.h");
276  cf.AddImplIncludeFile("KVBatchSystem.h");
277 
278  cf.GenerateCode();
279 }
280 
281 
282 
285 
287 {
288  // Replace any special symbols in auto-format jobname with current values
289 
291  tmp.ReplaceAll("KVEventFiltering",
292  Form("%s_%s_FILTER_%s", fModel.Data(), fFilterSystem.Data(), fFilterDataSet.Data()));
293  tmp.ReplaceAll(" ", "");
294  tmp.ReplaceAll("@", "_");
295  tmp.ReplaceAll("+", "_");
296  tmp.ReplaceAll("/", "_");
297  return tmp;
298 }
299 
300 
bool Bool_t
char Char_t
constexpr Bool_t kFALSE
constexpr Bool_t kTRUE
kEnvUser
Option_t Option_t TPoint TPoint const char GetTextMagnitude GetFillStyle GetLineColor GetLineWidth GetMarkerStyle GetTextAlign GetTextColor GetTextSize void char Point_t Rectangle_t WindowAttributes_t Float_t Float_t Float_t Int_t Int_t UInt_t UInt_t Rectangle_t Int_t Int_t Window_t TString Int_t GCValues_t GetPrimarySelectionOwner GetDisplay GetScreen GetColormap GetNativeEvent const char const char dpyName wid window const char font_name cursor keysym reg const char only_if_exist regb h Point_t winding char text const char depth char const char Int_t count const char ColorStruct_t color const char filename
Option_t Option_t TPoint TPoint const char GetTextMagnitude GetFillStyle GetLineColor GetLineWidth GetMarkerStyle GetTextAlign GetTextColor GetTextSize void char Point_t Rectangle_t WindowAttributes_t Float_t Float_t Float_t Int_t Int_t UInt_t UInt_t Rectangle_t Int_t Int_t Window_t TString Int_t GCValues_t GetPrimarySelectionOwner GetDisplay GetScreen GetColormap GetNativeEvent const char const char dpyName wid window const char font_name cursor keysym reg const char only_if_exist regb h Point_t winding char text const char depth char const char Int_t count const char ColorStruct_t color const char Pixmap_t Pixmap_t PictureAttributes_t attr const char char ret_data h unsigned char height h Atom_t Int_t ULong_t ULong_t unsigned char prop_list Atom_t Atom_t Atom_t Time_t format
char * Form(const char *fmt,...)
Factory class for generating skeleton files for new classes.
void GenerateCode()
Generate header and implementation file for currently-defined class.
void AddImplIncludeFile(const Char_t *filename)
Manager class which sets up and runs data analysis tasks.
const Char_t * GetACliCMode()
const UserClass & GetUserClass() const
virtual TString ExpandAutoBatchName(const Char_t *format) const
virtual void WriteBatchEnvFile(const TString &, Bool_t sav=kTRUE)
virtual Bool_t CheckIfUserClassIsValid(const KVString &alternative_base_class="")
KVString GetUserClassName()
const KVString & GetUserClassOptions() const
EProofMode GetProofMode() const
Long64_t GetNbEventToRead(void) const
virtual Bool_t ReadBatchEnvFile(const TString &)
KVDataAnalysisTask * GetAnalysisTask() const
TEnv * GetBatchInfoFile() const
TObject * First() const override
void Add(TObject *obj) override
TObject * FindObject(const char *name) const override
void Clear(Option_t *option="") override
Class piloting analyses of simulated data.
TString ExpandAutoBatchName(const Char_t *format) const override
Replace any special symbols in auto-format jobname with current values.
Bool_t NeedToChooseWhatToAnalyse() const override
KVSimDir * fSimDir
used for batch analysis
TChain * fAnalysisChain
TChain for analysis.
Bool_t ReadBatchEnvFile(const TString &) override
void GetInfosForJobNameFromFiles()
KVString GetRootDirectoryOfDataToAnalyse() const override
Returns path to data to be analysed.
KVUnownedList fListOfAuxFiles
[optional] list of original simulated data to be used during filtered data analysis
TString fFilterDataSet
name of dataset to be used for filtering the simulation
KVUnownedList fListOfSimFiles
list of files/trees to analyse
TString fFilterSystem
name of system to be used for filtering the simulation
TString fModel
name of model used for simulation
void SubmitTask() override
Set up and run the analysis.
static void Make(const Char_t *kvsname="MySimulatedAnalysis")
Generate a new simulated analysis selector class.
void WriteBatchEnvFile(const TString &, Bool_t sav=kTRUE) override
Handle directory containing simulated and/or filtered simulated data ,.
Definition: KVSimDir.h:43
const KVList * GetFiltDataList() const
Definition: KVSimDir.h:76
void SetAuxDirectory(const TString &)
Definition: KVSimDir.cpp:118
Bool_t HasAuxDirectory() const
Definition: KVSimDir.cpp:143
const Char_t * GetDirectory() const
Definition: KVSimDir.h:61
const KVList * GetSimDataList() const
Definition: KVSimDir.h:72
void AnalyseDirectory()
Definition: KVSimDir.cpp:171
TString GetAuxDirectory() const
Definition: KVSimDir.cpp:132
Handle file containing simulated and/or filtered simulated data ,.
Definition: KVSimFile.h:20
const Char_t * GetSystem() const
Definition: KVSimFile.h:88
const Char_t * GetBranchName() const
Definition: KVSimFile.h:125
Int_t GetRun() const
Definition: KVSimFile.h:103
Bool_t HasRun() const
Definition: KVSimFile.h:108
const Char_t * GetDataSet() const
Definition: KVSimFile.h:83
KVSimDir * GetSimDir() const
Definition: KVSimFile.h:68
Bool_t HasSystem() const
Definition: KVSimFile.h:93
Bool_t IsFiltered() const
Definition: KVSimFile.h:46
const Char_t * GetTreeName() const
Definition: KVSimFile.h:120
Extension of ROOT TString class which allows backwards compatibility with ROOT v3....
Definition: KVString.h:73
void Begin(TString delim) const
Definition: KVString.cpp:565
Bool_t End() const
Definition: KVString.cpp:634
KVString Next(Bool_t strip_whitespace=kFALSE) const
Definition: KVString.cpp:695
virtual Int_t Add(const char *name, Long64_t nentries=TTree::kMaxEntries)
Long64_t Process(const char *filename, Option_t *option="", Long64_t nentries=kMaxEntries, Long64_t firstentry=0) override
virtual void SetProof(Bool_t on=kTRUE, Bool_t refresh=kFALSE, Bool_t gettreeheader=kFALSE)
Long64_t GetEntries() const override
virtual Int_t GetEntries() const
virtual Bool_t IsEmpty() const
virtual const char * GetValue(const char *name, const char *dflt) const
virtual void SetValue(const char *name, const char *value, EEnvLevel level=kEnvChange, const char *type=nullptr)
virtual void SaveLevel(EEnvLevel level)
const char * GetName() const override
const char * GetTitle() const override
virtual const char * GetName() const
virtual void Info(const char *method, const char *msgfmt,...) const
const char * Data() const
Bool_t IsNull() const
void Form(const char *fmt,...)
TString & ReplaceAll(const char *s1, const char *s2)
long long Long64_t
ClassImp(TPyArg)